The academic version has the following precompiled executables bundled (MSMS, DSSP, HBPLUS, MUSTANG)

These applications are freely available for academic use and NOT commerical user (see links below)

These applications are currently being redistributed with WebStart for BETA testing purposes, ONLY .

Although these applications are freely available for academic use, I do not have the right to redistribute these applications, nor do you.

After beta testing period is over they will no longer be distributed with the Envision package.

So PLEASE if you publish results obtained with Envision and use any of the executables below PLEASE credit the original authours

For more information please visit each site

DSSP (Generates residue properties like solvent access for structure)

MSMS (Used to generate molecular surfaces in structure viewer)

HBPLUS (Used to calculate hydrogen bonds)

MUSTANG (Used to superimpose structures chain for chain on input)

To launch Envision via webstart click on appropriate link below

Windows Web Start

Linux Web Start

OSX Web Start (very experimental)

Quick start

Load sample database, from Envision MainViewer->Applications->DataInterface->Open->Sample then close window

Try alignments MainViewer->Applications->Alignment

Try structures MainViewer->Applications->Structure

Tips try loading several and play around with the viewer listen menu

Look at tutorials or scripts

To obtain jar files click on appropriate link below

Windows Jar File

Linux Jar File

Note: Start program with java -jar -Xmx1024M envision.jar

Note: To get the jar file to run you must have java3D installed

UITO users

Try right clicking and save link as so that the *.jnlp is saved somewhere locally not on desktop

Then right click and launch with webstart to start

Saving on desktop will mean constant trafic between AD and local machine

Good Luck, Chris