Defining User Properties
- Start Envision
- From the MainViewer Applications menu select DataInterface.
- Open a database for example
Sample. - Close DataInterface component.
 
- Starting the Property Viewer
- From the MainViewer
Applicationsmenu selectProperty. - Now from the Property Viewer Menu select
PropertythenproteinthenProtien Name
Note: This is how the property is defined
 
- From the MainViewer
- Defining a Property
- From the Property Viewer Menu select
New - In the
Entryfield put in an internal name for your property with no spaces. For example hab - In the
Descriptionfield enter the name of your property that will appear in Envision Menus. For example Organism Habitat - In the
Typefield select what type of data you are expecting. In our example selectstring - In the
Objectfield what biological object the property maps to. In our example selectprotein - In the
Groupfiles select a group that best describes you property. In our example selectwhatever - In the large text box at the bottom input a description of your Property. In our example enter
habitat where organims was collected - Now press
Add Property to Database - Now close the Property Viewer
 
- From the Property Viewer Menu select
- Entering data into New Property
- From the MainViewer
Applicationsmenu selectInformation. - Select
Proteintab at the bottom left you should see your propertyOrganism Habitat - Select
Protein Nameto display the property in the right hand worksheet - Select
Organism Habitatto display the property in the right hand worksheet - Now double click on the
vibrio_salomicida.a(row) andOrganism Habitat(column) cell. - You should now be able to enter a value for our example enter
cold sea
Note This information is not saved until you save the database, see step 6
- From the MainViewer
- Using the new Property
- From the MainViewer
Applicationmenu selectAlignment - From the Alignment Viewer
Listenmenu selectselection - From the MainViewer
Applicationmenu selectCreate Set - From the Create Result Set Viewer Menu select
NewtheResult Set - In the result set R0, input
proteinOrganism Habitat,substr,coldthen pressSto generate a selection - Now turn you attention to the Alignment Viewer you should see that
vibrio_salmonicida.ais selected. - It is selected because cold is a substring of
cold seawhich you entered as a value forOrganism Habitat
- From the MainViewer
- Saving the database
- To permanently store your property you need to save the database
- From the MainViewer
Applicationsmenu selectDatabase - From the
Saveoption selectOK - Note This will save your changes into the database
- After the database is saved close the Database viewer.