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Alignment

Introduction to Alignment

This Exercise is a basic introduction to seqeunce alignment based on what has be taught during the lectures. The exercise will include performing some manual alignment. Comparing PAM and BLOSUM scoring matrices. Use of Dot plot and multiple sequence alignment tools like ClustalW and T-Coffee.

Given below is the Tutorial and the example files required to complete this pratical. You can save there files on your desktop or someother folder for fututre use.

Tutorial

7seq.fas

3seq.fas

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