Pål Puntervoll

Pål Puntervoll
Senior Scientist/Service Scientist

Computational Biology Unit
Bergen Center for Computational Science
Høyteknologisenteret
Thormøhlensgate 55
N-5008 Bergen
Norway

Room: 5135
Phone: +47 5558 4078
Fax: +47 5558 4295
E-mail: pal.puntervoll@bccs.uib.no

The Eukaryotic Linear Motif resource (ELM) identification of functional sites in proteins

1. Karlsen OA, Kindingstad L, Angelskar SM, Bruseth LJ, Straume D, Puntervoll P, Fjellbirkeland A, Lillehaug JR, Jensen HB. (2005). Identification of a copper-repressible C-type heme protein of Methylococcus capsulatus (Bath). FEBS J. 272(24):6324-35.
   
2. Pocanschi CL, Apell HJ, Puntervoll P, Hogh B, Jensen HB, Welte W, Kleinschmidt JH. (2005). The Major Outer Membrane Protein of Fusobacterium nucleatum (FomA) Folds and Inserts into Lipid Bilayers via Parallel Folding Pathways. J Mol Biol. 2005 Nov 9; [Epub ahead of print]
   
3. Puntervoll, P., Aasland, R. (2004). Nomenclature for protein modules and their cognate motifs. In Modular Protein Domains. Edited by G. Cesareni, M. Gimona, M. Sudol, M. Yaffe: Wiley-VCH GmbH, Germany.
4. Puntervoll, P., Linding, R., Gemünd, C., Chabanis-Davidson, S., Mattingsdal, M., Cameron, S., Martin, D. M. A., Ausiello, G., Brannetti, B., Costantini, A., Ferrè, F., Maselli, V., Via, A., Cesareni, G., Diella, F., Superti-Furga, G., Wyrwicz, L., Ramu, C., McGuigan, C., Gudavalli, R., Letunic, I., Bork, P., Rychlewski, L., Küster, B., Helmer-Citterich, M., Hunter, W. N., Aasland, R., & Gibson, T. J. (2003). ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins. Nucleic Acids Res., 31, 3625-3630.
   
5. Puntervoll, P., Ruud, M., Bruseth, L. J., Kleivdal, H., Hogh, B. T., Benz, R. & Jensen, H. B. (2002). Structural characterization of the fusobacterial non-specific porin FomA suggests a 14-stranded topology, unlike the classical porins. Microbiology 148, 3395-3403.
6. Kleivdal, H., Puntervoll, P. & Jensen, H. B. (2001). Topological investigations of the FomA porin from Fusobacterium nucleatum and identification of the constriction loop L6. Microbiology 147, 1059-1067.
7. Puntervoll, P., Kleivdal, H., Dahl, K. O., Bitter, W., Tommassen, J. & Jensen, H. B. (2000). The Fusobacterium nucleatum porin FomA possesses the general topology of the non-specific porins. Microbiology 146, 1437-1445.
8. Jensen, H. B., Skeidsvoll, J., Fjellbirkeland, A., Hogh, B., Puntervoll, P., Kleivdal, H. & Tommassen, J. (1996). Cloning of the fomA gene, encoding the major outer membrane porin of Fusobacterium nucleatum ATCC10953. Microb Pathog 21, 331-342.